The detailed information of tRNA gene sequence


Sequence ID>C121013108
Genome IDCP003426
Search identical group
Phylum/ClassSpirochaetota
SpeciesBorrelia crocidurae str. Achema [CP003426]
Start position on genome 221223
End posion on genome 221296
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaagcttatg
tRNA gene sequence 
GGGCCTATAGCTCAGTTGGTTAGAGCATCCGACTCATAATCGGGTGGTCCCAGGTTCAAG
TCCTGGTAGGCCCAaat
Downstream region at tRNA end position 
taatttagtt
Secondary structure (Cloverleaf model)
>C121013108	Met	CAT
                   g      Aaat taatttagtt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     A - T          T G
                    T     G G T C C     A
      T G A        A      | | | | |     A
    T       C T C G       C C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    T + G
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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