The detailed information of tRNA gene sequence


Sequence ID>C123000283
Genome IDCP003775
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesBurkholderia cepacia GG4 [CP003774, CP003775]
Start position on genome 1883029
End posion on genome 1882951
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cttctcatct
tRNA gene sequence 
GGGCCCCTAGCTCATGCTTGGTTAGAGCAGCGAACTCATAATTCGTTGGTGCCGGGTTCG
ACTCCCGGGGGGCCCACCA
Downstream region at tRNA end position 
gattcgcttc
Secondary structure (Cloverleaf model)
>C123000283	Met	CAT
                   t      ACCA gattcgcttc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G          T C
                    T     G G C C C     A
    C G T A        A      | | | | |     G
  T         C T C G       C C G G G     C
  T         | | | |                 T T
  G         G A G C
    G T T A        A     TGGTG
                    G + T
                    C - G
                    G - C
                    A - T
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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