The detailed information of tRNA gene sequence


Sequence ID>C121002490
Genome IDCP002376
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema pallidum subsp. pertenue str. Gauthier [CP002376]
Start position on genome 243298
End posion on genome 243372
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ggggatttgT
tRNA gene sequence 
GGGTCAGTAGCTCTAATGGCAGAGCGTCGGTCTCCAAAACCGAATGTTGAAGGTTCGAGT
CCTTCCTGGCCTGAgt
Downstream region at tRNA end position 
gctttcgaaa
Secondary structure (Cloverleaf model)
>C121002490	Trp	CCA
                   T      GAgt gctttcgaaa
                     G + T
                     G - C
                     G - C
                     T + G
                     C - G
                     A - T
                     G - C          T G
                    T     C T T C C     A
      A A T        A      | | | | |     G
    T       C T C G       G A A G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     ATGTT
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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