The detailed information of tRNA gene sequence


Sequence ID>C121010807
Genome IDCP003319
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRickettsia massiliae str. AZT80 [CP003319]
Start position on genome 177298
End posion on genome 177373
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aaaatatgat
tRNA gene sequence 
AGGAGTGTAGCTCAATTGGTAGAGCGCCGGTCTCCAAAACCGGAGGTTGCGGGTTCGATG
CCTGTCGCTCCTGCCA
Downstream region at tRNA end position 
ttataggctt
Secondary structure (Cloverleaf model)
>C121010807	Trp	CCA
                   t      GCCA ttataggctt
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T + G
                     G - C          G T
                    T     T G T C C     A
      T A A        A      + | + | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK