The detailed information of tRNA gene sequence


Sequence ID>C121002500
Genome IDCP002376
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema pallidum subsp. pertenue str. Gauthier [CP002376]
Start position on genome 660372
End posion on genome 660445
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
tacagagcag
tRNA gene sequence 
GGAAGATTAGCTCATTCGGATAGAGCGTTGGCCTCCGGAGCCAAAGGCGGTGGGTTCAAA
TCCCGCATCTTCCAtcc
Downstream region at tRNA end position 
tcttacccac
Secondary structure (Cloverleaf model)
>C121002500	Arg	CCG
                   g      Atcc tcttacccac
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     T - A          T A
                    T     C G C C C     A
      T T A        A      | + | | |     A
    C       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        G     AGGCG
                    T - A
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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