The detailed information of tRNA gene sequence


Sequence ID>C121002454
Genome IDCP002375
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema pallidum subsp. pertenue str. CDC2 [CP002375]
Start position on genome 644198
End posion on genome 644270
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
tggggcacac
tRNA gene sequence 
GATCCATTAGCTCAGCGGAGAGAGCGGCCGCCTCCTAAGCGGCAGGTCGGACGTTCAAGT
CGTCCATGGATCAgga
Downstream region at tRNA end position 
acggcgatgg
Secondary structure (Cloverleaf model)
>C121002454	Arg	CCT
                   c      Agga acggcgatgg
                     G - C
                     A - T
                     T - A
                     C - G
                     C - G
                     A - T
                     T - A          T G
                    T     C C T G C     A
      C G A        A      | | | | |     A
    G       C T C G       G G A C G     C
    G       | | | |                 T T
    A       G A G C
      G A          G     AGGTC
                    G - C
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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