The detailed information of tRNA gene sequence


Sequence ID>C121001226
Genome IDAP012337
Search identical group
Phylum/ClassChloroflexota
SpeciesCaldilinea aerophila DSM 14535 = NBRC 104270 [AP012337]
Start position on genome 4203086
End posion on genome 4202996
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tccttgacgg
tRNA gene sequence 
GGAGAGGTCGCATAGCCTGGTCGAGTGCGCCCGTCTCGAAAACGGGTAGGGTTAACCGCC
CTCGAGGGTTCAAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
tgtacccaaa
Secondary structure (Cloverleaf model)
>C121001226	Ser	CGA
                   g      GCCA tgtacccaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    C C G A        C      | | | | |     A
  T         T A C G       G A G G G     C
  G         + | | |                 T T
  G         G T G C
    T C G A        G     TAGGGTTAACCGCCCTC
                    C - G
                    C - G
                    C - G
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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