The detailed information of tRNA gene sequence


Sequence ID>C121001207
Genome IDAP012337
Search identical group
Phylum/ClassChloroflexota
SpeciesCaldilinea aerophila DSM 14535 = NBRC 104270 [AP012337]
Start position on genome 1728300
End posion on genome 1728375
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
aagacctctt
tRNA gene sequence 
GGGCCAGTAGCTCAGTTGGGAGAGCGCTACAATCGCACTGTAGAGGTCAGGGGTTCAAGT
CCCCTCTGGTCCACAA
Downstream region at tRNA end position 
aaagccgatg
Secondary structure (Cloverleaf model)
>C121001207	Ala	CGC
                   t      ACAA aaagccgatg
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     T C C C C     A
      T G A        A      | | | | |     A
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    A - T
                  A       C
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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