The detailed information of tRNA gene sequence


Sequence ID>C121001236
Genome IDAP012337
Search identical group
Phylum/ClassChloroflexota
SpeciesCaldilinea aerophila DSM 14535 = NBRC 104270 [AP012337]
Start position on genome 1505388
End posion on genome 1505312
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
tgttgactgt
tRNA gene sequence 
CGGGGAGTAGCGCAGCTTGGTAGCGCGCTTCGTTCGGGTCGAAGAGGTCGGAGGTTCAAA
TCCTCTCTCCCCGACCA
Downstream region at tRNA end position 
caattcagcg
Secondary structure (Cloverleaf model)
>C121001236	Pro	CGG
                   t      ACCA caattcagcg
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T C T C C     A
      C G A        A      + | | | |     A
    T       C G C G       G G A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    G - C
                  T       T
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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