The detailed information of tRNA gene sequence


Sequence ID>C121005697
Genome IDCP003096
Search identical group
Phylum/ClassSynergistota
SpeciesThermovirga lienii DSM 17291 [CP003096]
Start position on genome 1279855
End posion on genome 1279778
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
gcacctcgtt
tRNA gene sequence 
CGGGGCGTAGCGCAGTCTGGTTAGCGCGCCTGGTTCGGGACTAGGAGGTCGGAGGTTCGA
ATCCTCTCGCCCCGACCA
Downstream region at tRNA end position 
agttttgaat
Secondary structure (Cloverleaf model)
>C121005697	Pro	CGG
                   t      ACCA agttttgaat
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
    C T G A        A      + | | | |     G
  T         C G C G       G G A G G     C
  G         | | | |                 T T
  G         G C G C
    T T A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G + T
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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