The detailed information of tRNA gene sequence


Sequence ID>C121016101
Genome IDFO117623
Search identical group
Phylum/ClassActinomycetota
SpeciesBlastococcus saxobsidens DD2 [FO117623]
Start position on genome 1523196
End posion on genome 1523291
Amino Acid Sup
Anticodon CTA
Upstream region at tRNA start position 
gtgcccggcG
tRNA gene sequence 
GAGGCGTCAGGGTGTCTGGTGGCCCCCGCGGCCTCTAAAGCCGACGTGGCCGAGTAGCTC
GGTCAGGCGGGTTCGATTCCCGTCCGCCTCCGCC
Downstream region at tRNA end position 
Aacacttccc
Secondary structure (Cloverleaf model)
>C121016101	Sup	CTA
                   G      CGCC Aacacttccc
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     T   C          T T
                    C     T G C C C     A
      C T G        A      + | | | |     G
    T       T G G G       G C G G G     C
    G         | | |                 T T
    G       C C C C
      T G G        C     CGTGGCCGAGTAGCTCGGTCAG
                    G   A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C T A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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