The detailed information of tRNA gene sequence


Sequence ID>C121001238
Genome IDAP012337
Search identical group
Phylum/ClassChloroflexota
SpeciesCaldilinea aerophila DSM 14535 = NBRC 104270 [AP012337]
Start position on genome 466173
End posion on genome 466098
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
gagcgggtac
tRNA gene sequence 
GGCGCATTCGTCTAGAGGCCTAGGACACAGCCCTCTCAAGGCTGAGACAGGGGTTCGAAT
CCCCTATGCGCTACCA
Downstream region at tRNA end position 
tgcagcaacc
Secondary structure (Cloverleaf model)
>C121001238	Glu	CTC
                   c      ACCA tgcagcaacc
                     G + T
                     G - C
                     C - G
                     G - C
                     C - G
                     A - T
                     T - A          T A
                    T     T C C C C     A
      A G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        A     AGAC
                    C - G
                    A - T
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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