The detailed information of tRNA gene sequence


Sequence ID>C121010398
Genome IDCP003304
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRickettsia canadensis str. CA410 [CP003304]
Start position on genome 8692
End posion on genome 8617
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
caattattat
tRNA gene sequence 
GGCCACGTAGCTCAGTTGGTAGAGCAAAGGACTGAAAATCCTTGTGTCGTTGGTTCAATT
CCAATCGTGGCCACCA
Downstream region at tRNA end position 
ccatttttgc
Secondary structure (Cloverleaf model)
>C121010398	Phe	GAA
                   t      ACCA ccatttttgc
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     C - G
                     G - C          T T
                    T     T A A C C     A
      T G A        A      + | | | |     A
    T       C T C G       G T T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    A - T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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