The detailed information of tRNA gene sequence


Sequence ID>C121012357
Genome IDCP003397
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRickettsia typhi str. TH1527 [CP003397]
Start position on genome 649934
End posion on genome 650010
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
gccataataa
tRNA gene sequence 
GGGTGATTAGCTCAGTTGGTCAGAGTATTACGTTGACATCGTAAAGGTCAGTGGTTCGAA
CCCACTATCACCCACCA
Downstream region at tRNA end position 
ttttatattt
Secondary structure (Cloverleaf model)
>C121012357	Val	GAC
                   a      ACCA ttttatattt
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     T - A          C A
                    T     T C A C C     A
      T G A        A      | | | | |     G
    T       C T C G       A G T G G     C
    G       | | | +                 T T
    G       G A G T
      T C A        A     AGGTC
                    T - A
                    T - A
                    A - T
                    C - G
                    G - C
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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