The detailed information of tRNA gene sequence


Sequence ID>C121001199
Genome IDAP012337
Search identical group
Phylum/ClassChloroflexota
SpeciesCaldilinea aerophila DSM 14535 = NBRC 104270 [AP012337]
Start position on genome 1277674
End posion on genome 1277748
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
aagcggacgg
tRNA gene sequence 
GGGCCTGTAGCTCAGCCGGTTAGAGCACTGTGCTGATAACGCAGGGGTCAGTGGTTCGAG
TCCACTCAGGCCCACag
Downstream region at tRNA end position 
gttagaaaac
Secondary structure (Cloverleaf model)
>C121001199	Ile	GAT
                   g      ACag gttagaaaac
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T G
                    T     T C A C C     A
      C G A        A      | | | | |     G
    C       C T C G       A G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    T - A
                    G - C
                    T + G
                    G - C
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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