The detailed information of tRNA gene sequence


Sequence ID>C121010390
Genome IDCP003304
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRickettsia canadensis str. CA410 [CP003304]
Start position on genome 717096
End posion on genome 717020
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
cttgaattgt
tRNA gene sequence 
GGGTTTGTAGCTCAGGTGGTTAGAGCACACGCCTGATAAGCGTGAGGTCGGAAGTTCAAG
TCTTCTCAAACCCACCA
Downstream region at tRNA end position 
ctaaatccct
Secondary structure (Cloverleaf model)
>C121010390	Ile	GAT
                   t      ACCA ctaaatccct
                     G - C
                     G - C
                     G - C
                     T - A
                     T - A
                     T - A
                     G - C          T G
                    T     T C T T C     A
      G G A        A      + | | | |     A
    T       C T C G       G G A A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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