The detailed information of tRNA gene sequence


Sequence ID>C121016022
Genome IDFN668944
Search identical group
Phylum/ClassBacillota
SpeciesClostridioides difficile BI9 [FN668944]
Start position on genome 9849
End posion on genome 9922
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ccaaaaaggt
tRNA gene sequence 
GGCGACATAGCCAAGTGGTAAGGCAGTGGACTGCAACTCCTTGATCCCCAGTTCGAATCT
GGGTGTCGCCTCCA
Downstream region at tRNA end position 
ataaaatgcg
Secondary structure (Cloverleaf model)
>C121016022	Cys	GCA
                   t      TCCA ataaaatgcg
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     C - G
                     A - T          T A
                    T     G G G T C     A
        G A        A      | | | | |     G
      T     A C C G       C C C A G     C
      G       | | |                 T T
      G     A G G C
        T A        A     GATC
                    G + T
                    T   T
                    G - C
                    G - C
                    A - T
                  C       C
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.-

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