The detailed information of tRNA gene sequence


Sequence ID>C121002480
Genome IDCP002375
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema pallidum subsp. pertenue str. CDC2 [CP002375]
Start position on genome 24710
End posion on genome 24635
Amino Acid Arg
Anticodon GCG
Upstream region at tRNA start position 
ccactccctT
tRNA gene sequence 
GAGACTATAGCTCAGCTGGATAGAGTGTCAGATTGCGGATCTGAAGGTCGACGGTTCGAA
TCCGCCTAGTCTCATta
Downstream region at tRNA end position 
cgggacttgt
Secondary structure (Cloverleaf model)
>C121002480	Arg	GCG
                   T      ATta cgggacttgt
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     T - A
                     A - T          T A
                    T     C C G C C     A
      C G A        A      |   | | |     G
    T       C T C G       G A C G G     C
    G       | | | +                 T T
    G       G A G T
      A T A        G     AGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    A - T
                  T       A
                  T       G
                    G C G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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