The detailed information of tRNA gene sequence


Sequence ID>C121000424
Genome IDAP012051
Search identical group
Phylum/ClassCaldisericota
SpeciesCaldisericum exile AZM16c01 [AP012051]
Start position on genome 1284764
End posion on genome 1284857
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
attgcggttt
tRNA gene sequence 
GGAGAGATGGCCGAGTAGGCTGAAGGCACTCGCCTGCTAAGCGAGTGAGGGGCTTAAAAC
CCCTCCGCGGGTTCGAATCCCGCTCTCTCCGCCA
Downstream region at tRNA end position 
gactccctcc
Secondary structure (Cloverleaf model)
>C121000424	Ser	GCT
                   t      GCCA gactccctcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C G C C C     A
    A T G A        G      | | | | |     G
  G         G C C G       G C G G G     C
  G           | | |                 T T
  C         A G G C
    T G A          A     TGAGGGGCTTAAAACCCCTCC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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