The detailed information of tRNA gene sequence


Sequence ID>C121005698
Genome IDCP003096
Search identical group
Phylum/ClassSynergistota
SpeciesThermovirga lienii DSM 17291 [CP003096]
Start position on genome 1252823
End posion on genome 1252730
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaatggttgt
tRNA gene sequence 
GGTGGGGTGGCCGAGAGGCTGAAGGCACTCGCCTGCTAAGCGAGTAGGGGGGCTGAAACC
TCCCTCCAGGGTTCGAATCCCTGTCCCACCGCCA
Downstream region at tRNA end position 
gttaaagcaa
Secondary structure (Cloverleaf model)
>C121005698	Ser	GCT
                   t      GCCA gttaaagcaa
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     G T C C C     A
      A G A        G      | | | | |     G
    G       G C C G       C A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        A     TAGGGGGGCTGAAACCTCCCTC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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