The detailed information of tRNA gene sequence


Sequence ID>C121006818
Genome IDCP003150
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesPseudomonas ogarae F113 [CP003150]
Start position on genome 5232147
End posion on genome 5232057
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cccgtgttgc
tRNA gene sequence 
GGAGAGCTGGCCGAGTGGCCGAAGGCGCTCCCCTGCTAAGGGAGTACACCTCAAAAGGGT
GTCGGGGGTTCGAATCCCCCGTTCTCCGCCA
Downstream region at tRNA end position 
ttattttttt
Secondary structure (Cloverleaf model)
>C121006818	Ser	GCT
                   c      GCCA ttattttttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G + T
                     C - G          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G G G G G     C
    G         | | |                 T T
    C       A G G C
      C G A        G     TACACCTCAAAAGGGTGTC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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