The detailed information of tRNA gene sequence


Sequence ID>C121000421
Genome IDAP012051
Search identical group
Phylum/ClassCaldisericota
SpeciesCaldisericum exile AZM16c01 [AP012051]
Start position on genome 798355
End posion on genome 798445
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
atatgcattt
tRNA gene sequence 
GGAGAGGTGACCGAGTGGCTTAAGGTGCACGCCTGGAGAGCGTGTGCGGGTCAAAAGCCT
GCCGTGGGTTCAAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
tttttggggg
Secondary structure (Cloverleaf model)
>C121000421	Ser	GGA
                   t      GCCA tttttggggg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     A
    G       G C C A       G T G G G     C
    G         | | |                 T T
    C       A G G T
      T T A        G     TGCGGGTCAAAAGCCTGCC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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