The detailed information of tRNA gene sequence


Sequence ID>C121002437
Genome IDCP002374
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema pallidum subsp. pertenue str. SamoaD [CP002374]
Start position on genome 24433
End posion on genome 24346
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tgcggccgta
tRNA gene sequence 
GGAGAGATGTCCGAGTGGCCGAAGGTACACGATTGGAAGTCGTGTGTGCCCCAAAAGGGT
ACCGAGGGTTCGAATCCCTCTCTCTCCGttc
Downstream region at tRNA end position 
cggggccgcc
Secondary structure (Cloverleaf model)
>C121002437	Ser	GGA
                   a      Gttc cggggccgcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G A G G G     C
    G         | |                   T T
    C       A G G T
      C G A        A     TGTGCCCCAAAAGGGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  T       G
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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