The detailed information of tRNA gene sequence


Sequence ID>C121005701
Genome IDCP003096
Search identical group
Phylum/ClassSynergistota
SpeciesThermovirga lienii DSM 17291 [CP003096]
Start position on genome 1243662
End posion on genome 1243575
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tgcgcaatgc
tRNA gene sequence 
GGAGAAGTGGCCGAGTGGTCGAAGGCGGGCGCTTGGAGAGCGTCTGAGCGGCAACGCTCC
GGGGGTTCGAATCCCTCCTTCTCCGCCA
Downstream region at tRNA end position 
tttcttattt
Secondary structure (Cloverleaf model)
>C121005701	Ser	GGA
                   c      GCCA tttcttattt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G C C G       G G G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TGAGCGGCAACGCTCC
                    G - C
                    G + T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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