The detailed information of tRNA gene sequence


Sequence ID>C121010376
Genome IDCP003304
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRickettsia canadensis str. CA410 [CP003304]
Start position on genome 546520
End posion on genome 546607
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cacaaatctt
tRNA gene sequence 
GGAGAGATGGCCGAGCGGTTTAAGGCGCATGCCTGGAAAGCGTGTTCACGACAACGTGTC
GGGGGTTCGAATCCCCCTCTCTCCGCCA
Downstream region at tRNA end position 
actctagaaa
Secondary structure (Cloverleaf model)
>C121010376	Ser	GGA
                   t      GCCA actctagaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C C C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G G G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TTCACGACAACGTGTC
                    C - G
                    A - T
                    T + G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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