The detailed information of tRNA gene sequence


Sequence ID>C121012345
Genome IDCP003396
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRickettsia prowazekii str. RpGvF24 [CP003396]
Start position on genome 565415
End posion on genome 565328
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aaattttttt
tRNA gene sequence 
GGAGAGATGGCCGAGAGGCTTAAGGCGCACGCCTGGAAAGCGTGTTCACAGAAATGTGTC
GGGGGTTCGAATCCCCCTCTCTCCGCCA
Downstream region at tRNA end position 
tcatgatatt
Secondary structure (Cloverleaf model)
>C121012345	Ser	GGA
                   t      GCCA tcatgatatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C C C C C     A
      A G A        G      | | | | |     G
    G       G C C G       G G G G G     C
    G         | | |                 T T
    C       A G G C
      T T A        G     TTCACAGAAATGTGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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