The detailed information of tRNA gene sequence


Sequence ID>C121001208
Genome IDAP012337
Search identical group
Phylum/ClassChloroflexota
SpeciesCaldilinea aerophila DSM 14535 = NBRC 104270 [AP012337]
Start position on genome 1728447
End posion on genome 1728520
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
agtagtgcat
tRNA gene sequence 
GGGCCTATAGCTCAGTTGGGAGAGCGCTACAATGGCATTGTAGAGGTCAAGGGTTCAAGT
CCCTTTAGGTCCACac
Downstream region at tRNA end position 
ggcgaccctt
Secondary structure (Cloverleaf model)
>C121001208	Ala	GGC
                   t      ACac ggcgaccctt
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     T - A
                     A - T          T G
                    T     T T C C C     A
      T G A        A      | | | | |     A
    T       C T C G       A A G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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