The detailed information of tRNA gene sequence


Sequence ID>C121001381
Genome IDCP001221
Search identical group
Phylum/ClassSpirochaetota
SpeciesLeptospira interrogans serovar Lai str. IPAV [CP001221, CP001222]
Start position on genome 2409933
End posion on genome 2410005
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
cttctcaagc
tRNA gene sequence 
GGGGACGTAGCTCAGTTGGGAGAGCATTTGAATGGCATTCAAAAGGTCGGGGGTTCGATT
CCCCTCGTCTCCAagt
Downstream region at tRNA end position 
tcgacttgcc
Secondary structure (Cloverleaf model)
>C121001381	Ala	GGC
                   c      Aagt tcgacttgcc
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     C - G
                     G - C          T T
                    T     T C C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     AGGTC
                    T - A
                    T - A
                    T - A
                    G - C
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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