The detailed information of tRNA gene sequence


Sequence ID>C121005696
Genome IDCP003096
Search identical group
Phylum/ClassSynergistota
SpeciesThermovirga lienii DSM 17291 [CP003096]
Start position on genome 1457806
End posion on genome 1457732
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
gccgttatgt
tRNA gene sequence 
GGGGCGTTAGCTCAGCGGGAGAGCACTTGCATGGCATGCAAGGGGTCGGGGGTTCGAATC
CCCCACGCTCCACCA
Downstream region at tRNA end position 
tttttattgt
Secondary structure (Cloverleaf model)
>C121005696	Ala	GGC
                   t      ACCA tttttattgt
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C
                     T - A          T A
                    T     C C C C C     A
        G A        A      | | | | |     G
      C     C T C G       G G G G G     C
      G     | | | |                 T T
      G     G A G C
        G A        A     GGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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