The detailed information of tRNA gene sequence


Sequence ID>C121011337
Genome IDCP003342
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRickettsia rhipicephali str. 3-7-female6-CWPP [CP003342]
Start position on genome 785941
End posion on genome 786016
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
actatattgt
tRNA gene sequence 
GGGGTCATAGCTCAGTTGGTAGAGTGTTTGAATGGCATTCAAGAGGTCGGGGGTTCGAAT
CCCCCTGACTCCACCA
Downstream region at tRNA end position 
cttcctatca
Secondary structure (Cloverleaf model)
>C121011337	Ala	GGC
                   t      ACCA cttcctatca
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     C - G
                     A - T          T A
                    T     C C C C C     A
      T G A        A      | | | | |     G
    T       C T C G       G G G G G     C
    G       | | | +                 T T
    G       G A G T
      T A          G     AGGTC
                    T + G
                    T - A
                    T - A
                    G - C
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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