The detailed information of tRNA gene sequence


Sequence ID>C121012406
Genome IDCP003398
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRickettsia typhi str. B9991CWPP [CP003398]
Start position on genome 646448
End posion on genome 646373
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
atttgttatc
tRNA gene sequence 
GGGGTCATAGCTCAGTTGGTAGAGTATTTGAATGGCATTCAAACGGTCGGGGGTTCGATT
CCCCTTGACTCCACCA
Downstream region at tRNA end position 
tgtcttaatt
Secondary structure (Cloverleaf model)
>C121012406	Ala	GGC
                   c      ACCA tgtcttaatt
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     C - G
                     A - T          T T
                    T     T C C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G G G G G     C
    G       | | | +                 T T
    G       G A G T
      T A          A     CGGTC
                    T - A
                    T - A
                    T - A
                    G - C
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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