The detailed information of tRNA gene sequence


Sequence ID>C121001237
Genome IDAP012337
Search identical group
Phylum/ClassChloroflexota
SpeciesCaldilinea aerophila DSM 14535 = NBRC 104270 [AP012337]
Start position on genome 1215009
End posion on genome 1214933
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
tttttcgatt
tRNA gene sequence 
CGGGGCGTAGCGCAGCCTGGTAGCGCACTTGAATGGGGTTCAAGAGGTCGGAGGTTCAAA
TCCTCTCGCCCCGACCA
Downstream region at tRNA end position 
aagatggcaa
Secondary structure (Cloverleaf model)
>C121001237	Pro	GGG
                   t      ACCA aagatggcaa
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
      C G A        A      + | | | |     A
    C       C G C G       G G A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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