The detailed information of tRNA gene sequence


Sequence ID>C121001217
Genome IDAP012337
Search identical group
Phylum/ClassChloroflexota
SpeciesCaldilinea aerophila DSM 14535 = NBRC 104270 [AP012337]
Start position on genome 2793407
End posion on genome 2793482
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gaccttgtac
tRNA gene sequence 
GGAGACGTGGTGTAGCGGTTAGCATAACGGCCTGTCAAGCCGTAGGTCGCGGGTTCAAAT
CCCGTCGTCTCCGCCA
Downstream region at tRNA end position 
aaacgctcac
Secondary structure (Cloverleaf model)
>C121001217	Asp	GTC
                   c      GCCA aaacgctcac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T G C C C     A
      C G A        G      + | | | |     A
    G       T G T G       G C G G G     C
    G       + | | +                 T T
    T       G C A T
      T A          A     AGGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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