The detailed information of tRNA gene sequence


Sequence ID>C121010581
Genome IDCP003311
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRickettsia rickettsii str. Hlp#2 [CP003311]
Start position on genome 1001548
End posion on genome 1001624
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
ttaatttatg
tRNA gene sequence 
GCGGGTGTAGCTCAGTTGGTTAGAGCATCAGGTTGTGGTTCTGAGGGTCGCGGGTTCGAA
TCCCGTCACCCGCCCCA
Downstream region at tRNA end position 
tattgtggaa
Secondary structure (Cloverleaf model)
>C121010581	His	GTG
                   g      CCCA tattgtggaa
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    G + T
                  T       T
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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