The detailed information of tRNA gene sequence


Sequence ID>C121002498
Genome IDCP002376
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema pallidum subsp. pertenue str. Gauthier [CP002376]
Start position on genome 583441
End posion on genome 583515
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
gggtgctgaT
tRNA gene sequence 
TCCCCTGTAGCTCAGTTGGTAGAGCAAATGGCTGTTAACCATTGGGTCCGTGGTTCGAGC
CCGCGCGGGGGAGTga
Downstream region at tRNA end position 
tgtttttggt
Secondary structure (Cloverleaf model)
>C121002498	Asn	GTT
                   T      GTga tgtttttggt
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     T + G
                     G - C          C G
                    T     G C G C C     A
      T G A        A      | | + | |     G
    T       C T C G       C G T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    A - T
                    A - T
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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