The detailed information of tRNA gene sequence


Sequence ID>C121012361
Genome IDCP003397
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRickettsia typhi str. TH1527 [CP003397]
Start position on genome 839547
End posion on genome 839632
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
atcaacaatt
tRNA gene sequence 
GCCCGCGTGATGGAATGGTAGACATAACGGACTTAAAATCCGTGGAGTGTAAACTCTTGC
CGGTTCAAGTCCGGCCGTGGGTACCA
Downstream region at tRNA end position 
ttaaaagcct
Secondary structure (Cloverleaf model)
>C121012361	Leu	TAA
                   t      ACCA ttaaaagcct
                     G + T
                     C - G
                     C - G
                     C - G
                     G + T
                     C - G
                     G - C          T G
                    T     C G G C C     A
      T A A        G      | | | | |     A
    G       G G T A       G C C G G     C
    G         | | |                 T T
    T       A C A T
      A G          A     GGAGTGTAAACTCTT
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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