The detailed information of tRNA gene sequence


Sequence ID>C121011860
Genome IDCP003380
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesMethylophaga frappieri JAM7 [CP003380]
Start position on genome 2500093
End posion on genome 2500168
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
cgtttttctt
tRNA gene sequence 
GGGTGCTTAGCTCAGCTGGGAGAGCATCGCCCTTACAAGGCGAGGGTCGGGGGTTCGAAC
CCCTCAGCACCCACCA
Downstream region at tRNA end position 
gagataaaca
Secondary structure (Cloverleaf model)
>C121011860	Val	TAC
                   t      ACCA gagataaaca
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C
                     C - G
                     T - A          C A
                    T     C T C C C     A
      C G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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