The detailed information of tRNA gene sequence


Sequence ID>C121012366
Genome IDCP003397
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRickettsia typhi str. TH1527 [CP003397]
Start position on genome 1098780
End posion on genome 1098696
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
attatcatat
tRNA gene sequence 
GCGGATGTGATGGAACTGGTAGACATGCAAGATTTAGGTTCTTGTGCTGTGAGGCGTGGG
GGTTCAAGTCCCTTCATCCGTACCA
Downstream region at tRNA end position 
cttagattca
Secondary structure (Cloverleaf model)
>C121012366	Leu	TAG
                   t      ACCA cttagattca
                     G + T
                     C - G
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T G
                    T     T T C C C     A
      C A A        G      + + | | |     A
    T       G G T A       G G G G G     C
    G         | | |                 T T
    G       A C A T
      T A G        G     TGCTGTGAGGCGT
                    C - G
                    A - T
                    A - T
                    G - C
                    A - T
                  T       T
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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