The detailed information of tRNA gene sequence


Sequence ID>C121001231
Genome IDAP012337
Search identical group
Phylum/ClassChloroflexota
SpeciesCaldilinea aerophila DSM 14535 = NBRC 104270 [AP012337]
Start position on genome 2835085
End posion on genome 2834991
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
aatgaacggt
tRNA gene sequence 
GGGAAGGGATGCGTCCCGGTGGGCGTCCCGGTCTTCAAAACCGGTGGCAGGCGGCGCAGA
GTCGGCTGCGGTGGGTTCGACTCCCACGCCTTCCCgctg
Downstream region at tRNA end position 
ataggcggaa
Secondary structure (Cloverleaf model)
>C121001231	SeC	TCA
                   t      gctg ataggcggaa
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G   G          T C
                    A     C A C C C     A
      C C C        T      | | | | |     G
    G       T G C G       G T G G G     C
    G       + | | +                 T T
    T       G C G T
      G G          C     TGGCAGGCGGCGCAGAGTCGGCTGCG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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