The detailed information of tRNA gene sequence


Sequence ID>C121006214
Genome IDCP003119
Search identical group
Phylum/ClassActinomycetota
SpeciesGordonia polyisoprenivorans VH2 [CP003119]
Start position on genome 4814986
End posion on genome 4815080
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ggaacggcac
tRNA gene sequence 
GGAGGCGTATGGGTTCCTGGTGGGCCCCCCGGTCTTCAAAACCGGTGAGATCGAGTATCT
CGGTCTGGCGGGTTCGATTCCCGTCCGCCTCCGCCg
Downstream region at tRNA end position 
tgccgatcga
Secondary structure (Cloverleaf model)
>C121006214	SeC	TCA
                   c      GCCg tgccgatcga
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     T   C          T T
                    A     T G C C C     A
      C C T        T      + | | | |     G
    T       T G G G       G C G G G     C
    G       + | | |                 T T
    G       G C C C
      T G G        C     TGAGATCGAGTATCTCGGTCTG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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