The detailed information of tRNA gene sequence


Sequence ID>C121011746
Genome IDCP003360
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesDesulfomonile tiedjei DSM 6799 [CP003360]
Start position on genome 3200475
End posion on genome 3200378
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
atccgaaatt
tRNA gene sequence 
GGAGGTGGTAGAGTCCTGGTGGGCTCCGCGGTCTTCAAAACCGTAAGCAGGGCGCTAGTA
CCGTTCTGGGTGGGTTCGATTCCCATGCACCTCCGCCA
Downstream region at tRNA end position 
ttcccgacat
Secondary structure (Cloverleaf model)
>C121011746	SeC	TCA
                   t      GCCA ttcccgacat
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T - A
                     G - C
                     G   G          T T
                    T     T A C C C     A
      T C C        A      + | | | |     G
    G       T G A G       G T G G G     C
    G       + | | |                 T T
    T       G C T C
      G G          C     AAGCAGGGCGCTAGTACCGTTCTGG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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