The detailed information of tRNA gene sequence


Sequence ID>C121001221
Genome IDAP012337
Search identical group
Phylum/ClassChloroflexota
SpeciesCaldilinea aerophila DSM 14535 = NBRC 104270 [AP012337]
Start position on genome 4298488
End posion on genome 4298562
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
ataaaaggat
tRNA gene sequence 
GCGCCTGTAGCTCAGTGGACTAGAGCATCGGTCTTCGGAACCGAGTGTCGGGGGTTCGAA
TCCCTCCAGGCGTGCtc
Downstream region at tRNA end position 
gatacctcag
Secondary structure (Cloverleaf model)
>C121001221	Arg	TCG
                   t      GCtc gatacctcag
                     G + T
                     C - G
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     C T C C C     A
      T G A        A      | + | | |     G
    G       C T C G       G G G G G     C
    G       | | | |                 T T
    A       G A G C
      C T A        A     GTGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       G
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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