The detailed information of tRNA gene sequence


Sequence ID>C121006108
Genome IDCP003115
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema pallidum subsp. pallidum DAL-1 [CP003115]
Start position on genome 736176
End posion on genome 736249
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
agcgtaccac
tRNA gene sequence 
GGGATCATAGCTCACCCGGATAGAGCGACTGCCTTCTAAGCAGTAGGGAGGGGGTTCGAG
TCCCTCTGGTCCCAgtc
Downstream region at tRNA end position 
gtccccttgc
Secondary structure (Cloverleaf model)
>C121006108	Arg	TCT
                   c      Agtc gtccccttgc
                     G - C
                     G - C
                     G - C
                     A - T
                     T + G
                     C - G
                     A - T          T G
                    T     C T C C C     A
      C C A        A      | + | | |     G
    C       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        G     AGGGA
                    A - T
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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