The detailed information of tRNA gene sequence


Sequence ID>C121012367
Genome IDCP003397
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRickettsia typhi str. TH1527 [CP003397]
Start position on genome 1055822
End posion on genome 1055746
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
taagctacat
tRNA gene sequence 
GCACCCTTAGCTCAGCTGGATAGAGCAACAGATTTCTAATCTGTGGGTCAGAGGTTCGAA
TCCTTTAGGGTGCGCCA
Downstream region at tRNA end position 
ttcttcattt
Secondary structure (Cloverleaf model)
>C121012367	Arg	TCT
                   t      GCCA ttcttcattt
                     G - C
                     C - G
                     A - T
                     C - G
                     C - G
                     C - G
                     T - A          T A
                    T     T T T C C     A
      C G A        A      | + | | |     G
    T       C T C G       A G A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     GGGTC
                    A - T
                    C - G
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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