The detailed information of tRNA gene sequence


Sequence ID>C121001292
Genome IDAP012342
Search identical group
Phylum/ClassNitrospirota
SpeciesLeptospirillum ferrooxidans C2-3 [AP012342]
Start position on genome 213185
End posion on genome 213270
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tcagccgttt
tRNA gene sequence 
GGAGGGGTGGCCGAGTGGTCGATGGCGGCGGTCTTGAAAACCGTAGAGCGAAAGCTCCGT
GGGTTCGAATCCTACCCCCTCCGCCA
Downstream region at tRNA end position 
aatcccatct
Secondary structure (Cloverleaf model)
>C121001292	Ser	TGA
                   t      GCCA aatcccatct
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A T C C     A
      T G A        G      | | + | |     G
    G       G C C G       G T G G G     C
    G       + | | |                 T T
    T       T G G C
      C G A        G     AGAGCGAAAGCTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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