The detailed information of tRNA gene sequence


Sequence ID>C121005232
Genome IDCP003075
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesPelagibacterium halotolerans B2 [CP003075]
Start position on genome 1396888
End posion on genome 1396977
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gcggctcaac
tRNA gene sequence 
GGGTGGGTGGCAGAGTGGTTGATTGCACCGGTCTTGAAAACCGGCGGGCGTGAGAGCGTC
TCGGGAGTTCGAATCTCCCCCCACCCGCCA
Downstream region at tRNA end position 
ctttccaaac
Secondary structure (Cloverleaf model)
>C121005232	Ser	TGA
                   c      GCCA ctttccaaac
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C          T A
                    T     C C C T C     A
      T G A        G      | | | | |     G
    G       G A C G       G G G A G     C
    G       + | | |                 T T
    T       T T G C
      T G A        A     CGGGCGTGAGAGCGTCTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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