The detailed information of tRNA gene sequence


Sequence ID>C121006389
Genome IDCP003126
Search identical group
Phylum/ClassDeinococcota
SpeciesThermus sp. CCB_US3_UF1 [CP003126]
Start position on genome 341474
End posion on genome 341564
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gccatacctt
tRNA gene sequence 
GGAGGGTTGGCCGAGCGGTTGAAGGCGGCGGTCTTGAAAACCGCTGTGGGCCCTGGGCCC
ACCGGGGGTTCGAATCCCTCACCCTCCGCCA
Downstream region at tRNA end position 
accatgcctg
Secondary structure (Cloverleaf model)
>C121006389	Ser	TGA
                   t      GCCA accatgcctg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     T - A          T A
                    T     C T C C C     A
      C G A        G      | + | | |     G
    G       G C C G       G G G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TGTGGGCCCTGGGCCCACC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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