The detailed information of tRNA gene sequence


Sequence ID>C121001195
Genome IDAP012337
Search identical group
Phylum/ClassChloroflexota
SpeciesCaldilinea aerophila DSM 14535 = NBRC 104270 [AP012337]
Start position on genome 547658
End posion on genome 547732
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
agagaaacgt
tRNA gene sequence 
CGGGGAGTAGCGCAGTCTGGTAGCGCACAGCGTTTGGGACGCTGGGGTCGTAGGTTCAAA
TCCTATCTCCCCGACtc
Downstream region at tRNA end position 
gtgcgggtat
Secondary structure (Cloverleaf model)
>C121001195	Pro	TGG
                   t      ACtc gtgcgggtat
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T A T C C     A
      T G A        A      + | | | |     A
    C       C G C G       G T A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    A - T
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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