The detailed information of tRNA gene sequence


Sequence ID>C121001209
Genome IDAP012337
Search identical group
Phylum/ClassChloroflexota
SpeciesCaldilinea aerophila DSM 14535 = NBRC 104270 [AP012337]
Start position on genome 1860022
End posion on genome 1860095
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
gcatccatgt
tRNA gene sequence 
GCCGGCGTAGCTCAATCGGCAGAGCAGCTGTCTTGTAAACAGCAGGTTATCGGTTCGAGT
CCGATCGTCGGCTCtg
Downstream region at tRNA end position 
ccagaggtcg
Secondary structure (Cloverleaf model)
>C121001209	Thr	TGT
                   t      TCtg ccagaggtcg
                     G - C
                     C - G
                     C - G
                     G - C
                     G + T
                     C - G
                     G - C          T G
                    T     T A G C C     A
      T A A        A      | | | | |     G
    C       C T C G       A T C G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     AGGTT
                    G - C
                    C - G
                    T - A
                    G - C
                    T - A
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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