The detailed information of tRNA gene sequence


Sequence ID>C121006089
Genome IDCP003115
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema pallidum subsp. pallidum DAL-1 [CP003115]
Start position on genome 124988
End posion on genome 125061
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
aagcgcgtgT
tRNA gene sequence 
GGTCCCTTCGTCTATCGGTTAGGACATGAGATTTTCAATCTCAGAAGACGGGTTCAATTC
CCGTAGGGACTATtc
Downstream region at tRNA end position 
ttttctctat
Secondary structure (Cloverleaf model)
>C121006089	Glu	TTC
                   T      ATtc ttttctctat
                     G + T
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     T - A          T T
                    T     T G C C C     A
      C T A        C      | | | | |     A
    G       T C T G       A C G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          A     GAAG
                    T - A
                    G - C
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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